Sahinalp, S Cenk: search on Z-Library

The world's largest scientific articles store. 70,000,000+ articles for free.

1

PyGTED: Python Application for Computing Graph Traversal Edit Distance

Ebrahimpour Boroojeny, Ali, Shrestha, Akash, Sharifi-zarchi, Ali, Gallagher, Suzanne Renick, Sahinalp, SÃ¼leyman Cenk, Chitsaz, Hamidreza

Journal:

Journal of Computational Biology

Year:

2020

Language:

english

File:

PDF, 74 KB

english, 2020

2

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Fast Set Intersection Algorithm for Sorted Sequences

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 162 KB

english, 2004

3

Sketching algorithms for genomic data analysis and querying in a secure enclave

Kockan, Can, Zhu, Kaiyuan, Dokmai, Natnatee, Karpov, Nikolai, Kulekci, M. Oguzhan, Woodruff, David P., Sahinalp, S. Cenk

Journal:

Year:

2020

File:

PDF, 3.02 MB

2020

4

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS

Chen, Feng, Wang, Shuang, Jiang, Xiaoqian, Ding, Sijie, Lu, Yao, Kim, Jihoon, Sahinalp, S. Cenk, Shimizu, Chisato, Burns, Jane C., Wright, Victoria J., Png, Eileen, Hibberd, Martin L., Lloyd, David D.

Journal:

Year:

2017

Language:

english

File:

PDF, 490 KB

english, 2017

5

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Approximate String Matching Using Compressed Suffix Arrays

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 216 KB

english, 2004

6

Allelic decomposition and exact genotyping of highly polymorphic and structurally variant genes

Numanagić, Ibrahim, Malikić, Salem, Ford, Michael, Qin, Xiang, Toji, Lorraine, Radovich, Milan, Skaar, Todd C., Pratt, Victoria M., Berger, Bonnie, Scherer, Steve, Sahinalp, S. Cenk

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 694 KB

english, 2018

7

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || A Bayesian Active Learning Experimental Design for Inferring Signaling Networks

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 746 KB

english, 2017

8

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || AllSome Sequence Bloom Trees

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 1.53 MB

english, 2017

9

PRESAGE: PRivacy-preserving gEnetic testing via SoftwAre Guard Extension

Chen, Feng, Wang, Chenghong, Dai, Wenrui, Jiang, Xiaoqian, Mohammed, Noman, Al Aziz, Md Momin, Sadat, Md Nazmus, Sahinalp, Cenk, Lauter, Kristin, Wang, Shuang

Journal:

BMC Medical Genomics

Year:

2017

Language:

english

File:

PDF, 1.22 MB

english, 2017

10

ReMixT: clone-specific genomic structure estimation in cancer

McPherson, Andrew W., Roth, Andrew, Ha, Gavin, Chauve, Cedric, Steif, Adi, de Souza, Camila P. E., Eirew, Peter, Bouchard-Côté, Alexandre, Aparicio, Sam, Sahinalp, S. Cenk, Shah, Sohrab P.

Journal:

Year:

2017

Language:

english

File:

PDF, 1.80 MB

english, 2017

11

Protein-Protein Interaction Network Evaluation for Identifying Potential Drug Targets

Hormozdiari, Fereydoun, Salari, Raheleh, Bafna, Vineet, Sahinalp, S. Cenk

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 753 KB

english, 2010

12

Preface: Selected Articles from RECOMB 2017

Journal:

Journal of Computational Biology

Year:

2018

Language:

english

File:

PDF, 26 KB

english, 2018

13

MechRNA: prediction of lncRNA mechanisms from RNA-RNA and RNA-protein interactions

Gawronski, Alexander R, Uhl, Michael, Zhang, Yajia, Lin, Yen-Yi, Niknafs, Yashar S, Ramnarine, Varune R, Malik, Rohit, Feng, Felix, Chinnaiyan, Arul M, Collins, Colin C, Sahinalp, S Cenk, Backofen, Ro

Journal:

Year:

2018

Language:

english

File:

PDF, 504 KB

english, 2018

14

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Approximate String Matching Using Compressed Suffix Arrays

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 216 KB

2004

15

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Small Phylogeny Problem: Character Evolution Trees

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 206 KB

2004

16

mrsFAST: a cache-oblivious algorithm for short-read mapping

Sahinalp, S Cenk, Hach, Faraz, Hormozdiari, Fereydoun, Alkan, Can, Hormozdiari, Farhad, Birol, Inanc, Eichler, Evan E

Journal:

Year:

2010

Language:

english

File:

PDF, 97 KB

english, 2010

17

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 1012 KB

english, 2017

18

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 6577 || Hapsembler: An Assembler for Highly Polymorphic Genomes

Bafna, Vineet, Sahinalp, S. Cenk

Year:

2011

Language:

english

File:

PDF, 383 KB

english, 2011

19

An efficient algorithm for sequence comparison with block reversals

S. Muthukrishnan, S. Cenk Sahinalp

Journal:

Theoretical Computer Science

Year:

2004

Language:

english

File:

PDF, 192 KB

english, 2004

20

SRRM4 Drives Neuroendocrine Transdifferentiation of Prostate Adenocarcinoma Under Androgen Receptor Pathway Inhibition

Li, Yinan, Donmez, Nilgun, Sahinalp, Cenk, Xie, Ning, Wang, Yuwei, Xue, Hui, Mo, Fan, Beltran, Himisha, Gleave, Martin, Wang, Yuzhuo, Collins, Colin, Dong, Xuesen

Journal:

European Urology

Year:

2016

Language:

english

File:

PDF, 4.51 MB

english, 2016

21

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Maximal Common Connected Sets of Interval Graphs

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 238 KB

english, 2004

22

HIT'nDRIVE: Patient-specific multi-driver gene prioritization for precision oncology

Shrestha, Raunak, Hodzic, Ermin, Sauerwald, Thomas, Dao, Phuong, Wang, Kendric, Yeung, Jake, Anderson, Shawn, Vandin, Fabio, Haffari, Gholamreza, Collins, Colin C, Sahinalp, Cenk

Journal:

Genome Research

Year:

2017

Language:

english

File:

PDF, 2.77 MB

english, 2017

23

Mutational Analysis of Gene Fusions Predicts Novel MHC Class I-Restricted T cell Epitopes & Immune Signatures in a Subset of Prostate Cancer

Kalina, Jennifer L., Neilson, David S., Lin, Yen-Yi, Hamilton, Phineas T., Comber, Alexandra Paige, Loy, Emma M.H., Sahinalp, S. Cenk, Collins, Colin C., Hach, Faraz, Lum, Julian J.

Journal:

Clinical Cancer Research

Year:

2017

Language:

english

File:

PDF, 1.75 MB

english, 2017

24

[IEEE 2019 IEEE International Conference on Big Data (Big Data) - Los Angeles, CA, USA (2019.12.9-2019.12.12)] 2019 IEEE International Conference on Big Data (Big Data) - SubGraph2Vec: Highly-Vectorized Tree-like Subgraph Counting

Chen, Langshi, Li, Jiayu, Sahinalp, Cenk, Marathe, Madhav, Vullikanti, Anil, Nikolaev, Andrey, Smirnov, Egor, Israfilov, Ruslan, Qiu, Judy

Year:

2019

File:

PDF, 1.39 MB

2019

25

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Finding Biclusters by Random Projections

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 267 KB

english, 2004

26

[ACM Press the thirty-first annual ACM symposium - Atlanta, Georgia, United States (1999.05.01-1999.05.04)] Proceedings of the thirty-first annual ACM symposium on Theory of computing - STOC '99 - Compact grid layouts of multi-level networks

Muthukrishnan, S., Paterson, Mike, Sahinalp, Süleyman Cenk, Suel, Torsten

Year:

1999

Language:

english

File:

PDF, 812 KB

english, 1999

27

[ACM Press the tenth annual ACM symposium - Puerto Vallarta, Mexico (1998.06.28-1998.07.02)] Proceedings of the tenth annual ACM symposium on Parallel algorithms and architectures - SPAA '98 - Layout of the batcher bitonic sorter (extended abstract)

Even, Shimon, Muthukrishnan, S., Paterson, Michael S., Sahinalp, Süleyman Cenk

Year:

1998

Language:

english

File:

PDF, 854 KB

english, 1998

28

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 ||

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 18.79 MB

english, 2017

29

Ultra High-Dimensional Nonlinear Feature Selection for Big Biological Data

Yamada, Makoto, Tang, Jiliang, Lugo-Martinez, Jose, Hodzic, Ermin, Shrestha, Raunak, Ouyang, Hua, Radivojac, Predrag, Sahinalp, Cenk, Menczer, Filippo, Chang, Yi, Saha, Avishek, Mamitsuka, Hiroshi, Yi

Journal:

IEEE Transactions on Knowledge and Data Engineering

Year:

2018

Language:

english

File:

PDF, 3.76 MB

english, 2018

30

The Complexity of Gene Placement

Leslie Ann Goldberg, Paul W Goldberg, Mike Paterson, Pavel Pevzner, Süleyman Cenk Sahinalp, Elizabeth Sweedyk

Journal:

Journal of Algorithms

Year:

2001

Language:

english

File:

PDF, 138 KB

english, 2001

31

[ACM Press the twenty-sixth annual ACM symposium - Montreal, Quebec, Canada (1994.05.23-1994.05.25)] Proceedings of the twenty-sixth annual ACM symposium on Theory of computing - STOC '94 - Symmetry breaking for suffix tree construction

Sahinalp, Sühleyman Cenk, Vishkin, Uzi

Year:

1994

Language:

english

File:

PDF, 935 KB

english, 1994

32

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomes

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 337 KB

english, 2017

33

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Reversal Distance without Hurdles and Fortresses

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 175 KB

english, 2004

34

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 6577 || Constrained De Novo Sequencing of Peptides with Application to Conotoxins

Bafna, Vineet, Sahinalp, S. Cenk

Year:

2011

Language:

english

File:

PDF, 364 KB

english, 2011

35

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || On the Average Sequence Complexity

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 260 KB

english, 2004

36

The Role of Unequal Crossover in Alpha-Satellite DNA Evolution: A Computational Analysis

Alkan, Can, Eichler, Evan E., Bailey, Jeffrey A., Cenk Şahinalp, S., Tüzün, Eray

Journal:

Journal of Computational Biology

Year:

2004

Language:

english

File:

PDF, 310 KB

english, 2004

37

Towards Improved Assessment of Functional Similarity in Large-Scale Screens: A Study on Indel Length

Schönhuth, Alexander, Salari, Raheleh, Hormozdiari, Fereydoun, Cherkasov, Artem, Cenk Sahinalp, S.

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 328 KB

english, 2010

38

Not All Scale-Free Networks Are Born Equal: The Role of the Seed Graph in PPI Network Evolution

Hormozdiari, Fereydoun, Berenbrink, Petra, Prulj, Nataša, Sahinalp, S. Cenk

Journal:

PLoS Computational Biology

Year:

2007

Language:

english

File:

PDF, 1.37 MB

english, 2007

39

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 496 KB

english, 2017

40

Computational identification of micro-structural variations and their proteogenomic consequences in cancer

Lin, Yen-Yi, Gawronski, Alexander, Hach, Faraz, Li, Sujun, Numanagić, Ibrahim, Sarrafi, Iman, Mishra, Swati, McPherson, Andrew, Collins, Colin, Radovich, Milan, Tang, Haixu, Sahinalp, S Cenk

Journal:

Year:

2017

Language:

english

File:

PDF, 397 KB

english, 2017

41

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 6577 || Paired de Bruijn Graphs: A Novel Approach for Incorporating Mate Pair Information into Genome Assemblers

Bafna, Vineet, Sahinalp, S. Cenk

Year:

2011

Language:

english

File:

PDF, 374 KB

english, 2011

42

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 6577 || IsoLasso: A LASSO Regression Approach to RNA-Seq Based Transcriptome Assembly

Bafna, Vineet, Sahinalp, S. Cenk

Year:

2011

Language:

english

File:

PDF, 613 KB

english, 2011

43

Periodicity testing with sublinear samples and space

Ergun, Funda, Muthukrishnan, S., Sahinalp, Cenk

Journal:

ACM Transactions on Algorithms

Year:

2010

Language:

english

File:

PDF, 115 KB

english, 2010

44

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Computational Model for RNA Multiple Structural Alignment

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 452 KB

english, 2004

45

[Lecture Notes in Computer Science] Research in Computational Molecular Biology Volume 10229 || Resolving Multicopy Duplications de novo Using Polyploid Phasing

Sahinalp, S. Cenk

Year:

2017

Language:

english

File:

PDF, 451 KB

english, 2017

46

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || Improved Single and Multiple Approximate String Matching

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

File:

PDF, 372 KB

2004

47

Fast prediction of RNA-RNA interaction

Raheleh Salari, Rolf Backofen, S Cenk Sahinalp

Journal:

Algorithms for Molecular Biology

Year:

2010

Language:

english

File:

PDF, 438 KB

english, 2010

48

Comparative QSAR- and Fragments Distribution Analysis of Drugs, Druglikes, Metabolic Substances, and Antimicrobial Compounds

Karakoc, Emre, Sahinalp, S. Cenk, Cherkasov, Artem

Journal:

Journal of Chemical Information and Modeling

Year:

2006

Language:

english

File:

PDF, 807 KB

english, 2006

49

[Lecture Notes in Computer Science] Combinatorial Pattern Matching Volume 3109 || A Combinatorial Shape Matching Algorithm for Rigid Protein Docking

Sahinalp, Suleyman Cenk, Muthukrishnan, S., Dogrusoz, Ugur

Year:

2004

Language:

english

File:

PDF, 830 KB

english, 2004

50

Publisher Correction: Optimal compressed representation of high throughput sequence data via light assembly

Ginart, Antonio A., Hui, Joseph, Zhu, Kaiyuan, Numanagić, Ibrahim, Courtade, Thomas A., Sahinalp, S. Cenk, Tse, David N.

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 240 KB

english, 2018

To build up a library is to create a life. It’s never just a random collection of books.

— Carlos María Domínguez

Official channel

Z-Library Desktop Launcher

Z-Library Since 2009 support@1delivery.pm

EnglishРусскийEspañolItalianoελληνικάاللغة العربيةBahasa IndonesiaBahasa Malaysiaहिन्दीDeutschFrançaisPortuguêsУкраїнськаPolski中文繁體中文日本語Tiếng ViệtAzərbaycan DiliՀայոց լեզուภาษาไทยTürk Diliქართველიবাংলাپښتوతెలుగుاردو한국어SrpskiБългарски